# NOTICE OF INTENT FOR LABORATORY TESTING AND SEQUENCING SERVICES Canonical: https://abierto.us/opportunities/noiniaid242222314 - Solicitation number: NOI-NIAID-24-2222314 - Notice type: Special notice - Status: Closed. Deadline was June 21, 2024 at 10:00 AM EDT - Department: Department of Health and Human Services - Agency: National Institutes of Health - Contracting office: National Institutes of Health Niaid (75N930) - NAICS: 541380 Testing Laboratories and Services - Product or service code: Q301 Reference Laboratory Testing - Place of performance: Fremont, California - County: Alameda County (FIPS 06001). https://abierto.us/counties/alameda-county-ca-06001 - City: Fremont. https://abierto.us/cities/fremont-ca-0626000 - First posted: June 11, 2024 - Last posted: June 11, 2024 - SAM.gov: https://sam.gov/workspace/contract/opp/487d552550804249a2a5e6f32a48b1d0/view ## Description **PRE-SOLICITATION NOTICE ID:** **NOI-NIAID-24-2222314 Post Date:** **June 11, 2024 Response Date:** **June 21, 2024 NAICS:** 541380 This is a Notice of Intent, NOT a request for proposal. The National Institute of Allergy and Infectious Diseases (NIAID) of the National Institutes of Health (NIH) intends to negotiate on an other than full and open competition basis with SeqMatic, LLC for this requirement to procure the isolation in combination with the library preparation of samples by purchasing the whole genome sequencing and the single-nuclei sequencing services for continuation of the study. Since single nuclei sequencing using flash frozen tissue was performed by SeqMatic LLC for the initial portion of this study, the request is to continue utilizing their same sequencing infrastructure to make comparisons across the samples. Utilizing the same preparation techniques and sequencing will provide the most comparable results to the sequencing that has already been performed by SeqMatic LLC. Additionally, SeqMatic provides all isolation and preparation of the cells for library prep for the single-cell sequencing as well as the TCR sequencing. Description of need: 10X Single Cell Thawing and Resuspension of Cryopreserved Cells (per sample)-SKU#SL-10X-022, QTY 8 Chromium Single Cell 5? Gene Expression (GEX) Library Preparation (per library) Immune profiling (VDJ) library preparation not included (add item SL-10X-008)- Next GEM v2 Kit-SKU#SL-10X-005, QTY 8 Kick-Off Meeting Required-1 week lead time required prior to sample shipment. **Post GEM:** Chromium Single Cell Immune Profiling V(D)J Enriched Library Construction (per library)-SKU#- SL-10X-008, Requires Single Cell 5? Gene Expression (GEX) Library Preparation (SL-10X-005), QTY 8 NovaSeq X Series 10B Sequencing Run, 300 cycles (per lane)• Paired End Reads 2x150; Yields ~1.0-1.25B reads per lane; ~300-375Gb output, QTY 2 • Note: Read lengths are fixed to 151,10,10,151 and cannot be lengthened for single lane orders. Trimming of reads shorter than 2x150 is available for no charge. • FASTQ file delivery only. No bcl files or run stats. Billing to be monthly or quarterly in arrears Period of Performance: 7/1/2024-6/30/2025 Place of Performance Bethesda, MD 20892 The statutory authority for this sole source requirement is 41 U.S.C. 1901 (a) (1) as implemented by FAR 13.106-1 only one responsible source and no other supply of service will satisfy agency requirements. THIS IS NOT A REQUEST FOR PROPOSAL. All responsible sources that could provide comparable services may submit a capability statement. All required documents must be submitted via the NIAID electronic Simplified Acquisition Submission System (eSASS) website at https://esass.nih.gov by June 21, 2024 10:00 am. All vendors must register in the eSASS system to submit their documentation. Instructions on how to register /submit documents are included on the website. All responses received by the closing date of this synopsis will be considered by the Government. A determination not to compete this requirement, based upon responses to this notice, is solely within the discretion of the Government. ## Publications - June 11, 2024: Special notice, due June 21, 2024 at 10:00 AM EDT. Notice 487d552550804249a2a5e6f32a48b1d0. https://sam.gov/workspace/contract/opp/487d552550804249a2a5e6f32a48b1d0/view ## Points of contact - Leah Hinson, leah.hinson@nih.gov --- Source: SAM.gov Contract Opportunities bulk extract. Confirm deadlines on SAM.gov before responding. Cite https://abierto.us/opportunities/noiniaid242222314.